Top San Juan Islands Water Tours

Explore Washington state’s San Juan Islands Monument on this sea kayak tour starting in Anacortes. Join a small group to paddle past the stunning scenery of uninhabited islands including Burrows Island. Spot local wildlife such as harbor seals, porpoises, several fish species, and sometimes orcas. All sea kayaking equipment, life jackets, and safety gear are included for a safe and comfortable experience.

Spend a picturesque six hours in and around the water on this kayaking tour, with a friendly guide to help you navigate the water and prepare your lunch on the beach. You’ll float through a wildlife habitat that’s home to the likes of seals, porpoises, and orcas. But don’t forget to look up for a chance at spotting some eagles too.

Get up close with the killer whales of Anacortes, the home port to the San Juan Islands, on this whale-watching cruise led by naturalist guides. Climb aboard a Blackfish fleet vessel and travel through some of the most picturesque scenery in the Pacific Northwest searching for orca, humpback, and gray whales. Along the way, see ocean wildlife in their natural environment, like seals, porpoises, sea lions and otters—plus a wide variety of birds and more.

See Whidbey Island in Washington from a fresh perspective with a small-group kayaking tour in Deception Pass State Park. Meet your guide at 4399 Bowman Bay Rd and climb into a sea kayak to explore the calm waters of Bowman Bay. Learn the basics of paddling and admire views of wildlife, Fidalgo Island, and more. All gear including life jackets and paddles is provided.

Observe Pacific Northwest whales in their natural environment on a 3.5-hour tour from Seattle. You have the chance to get up close to orcas, humpbacks, and minkes. Learn about the marine life from your on board guide.  In the event that you don’t see any whales during your excursion, enjoy a second journey on the boat free of charge.

Get up close with the killer whales off Orcas Island, the largest of the San Juan Islands near Seattle, on this guided, 3.5-hour whale-watching cruise from Eastsound. Led by naturalist guides and captains, climb aboard a Blackfish fleet vessel and travel through some of the most picturesque scenery in the Pacific Northwest searching for orca, humpback and gray whales. Along the way, see ocean wildlife in their natural environment, like seals, porpoises, sea lions and otters — plus a wide variety of birds and more. Sightings are guaranteed from April through early September.

This full day adventure includes about 4-5 hours of kayaking, high speed powerboat transport to and from the island, exploration on the beaches and a lunch break. We take a power boat to Sucia Island where we spend the day exploring the many coves and rocky shores of this spectacular state park. After a brief kayaking safety orientation, you and your guide will hop in your kayaks for a 4 to 5 hour paddle which includes a lunch stop (Lunch is not provided) and short hike at a remote beach. As we paddle around the island we stop by prime wildlife viewing locations and explore some of Sucia’s natural history. After the adventure of a lifetime we return to Orcas by power boat. One can encounter bald eagles, osprey, harlequin ducks, river otters, harbor seals, sea lions, porpoise and even the occasional orca whale!

Experience the diverse marine life of the San Juan Islands on this Classic Whale Watch & Wildlife Tour. Spanning 3-4 hours, this adventure is ideal for families, groups, and wildlife enthusiasts. With knowledgeable Marine Naturalists onboard, encounter orcas, humpbacks, seals, bald eagles, and more amidst stunning coastal scenery. The tour guarantees sightings of marine wildlife while sharing insights into the region's unique ecology and geology. Whales are spotted on 95% of tours between June and September. - Duration: 3-4 hours, perfect for families and large groups - Group Size: Accommodates 1-40 participants - Sunset tours offer gorgeous evening lighting - Expert guidance from experienced Captains and Marine Naturalists - Departures from the historic Roche Harbor resort, on the north side of San Juan Island

Join us on this 3 hour kayaking tour from the north shore on Orcas Island. Surrounded by private property on land, the park is only accessible by kayak, canoe, or row boat. Once at the park we take a brief break on the beach to enjoy a nature walk and beautiful views of Mt. Baker and the surrounding islands before we head back. These kayak tours explore the best wildlife area Orcas Island has to offer! It is home to many harbor seals, porpoises, shore birds, and eagles.

For those who are especially passionate about Orcas, this trip is for you! Be prepared for up to five hours on the water in the diligent quest for the region's Biggs killer whales. This population of orca is healthy and thriving and can be found year-round in the Salish Sea. They are incredible to watch and can travel over 100 miles in a single day. We load up on our on fastest vessels and depart in search of orcas. We may also encounter the regions other species of whales and wildlife, but the focus is finding orcas. Our success rate is very high, over 95 percent! Tours typically last between 3 to 5 hrs. It can often be a cold trip so bundle up. Don't forget your camera!

Take an adventure on San Juan Island through Griffin Bay. Jump in a kayak and follow the instructor through the calm waters to see what Dinner Island has to offer. Look out for harbor seals, river otters, and tons of seabirds in their natural habitat. As you paddle, marvel at the site of glacier-covered Mt. Baker and the dazzling Olympic Mountain range.

Join our guides to explore the magical bioluminescent plankton blooms that light up the coasts of the Rosario Mansion. Departing from the historic Rosario Resort, this 2 hour tour will bring you to some of the best bioluminescence the coasts of Orcas have to offer. With each stroke of your paddle, watch as the waters below come to life. To bring you the brightest sightings, this tours departure schedule is built to depart around new moons for the darkest nights. Learn more about these incredible life forms and all others you may encounter during our adventure. ***IMPORTANT NOTE*** Departure times will vary depending on the time of month (sunset) and is ONLY available on certain dates of each month (new moon). Jun 19, 2025 - Jul 31 (Check-In Time9:30 PM/ Depart 10:00 PM) Aug 17, 2025 - Aug 31 (Check-In Time9:00 PM/ Depart 9:30 PM) Sep 15, 2025 - Sep 28 (Check-In Time8:30 PM/ Depart 9:00 PM)

Experience the thrill of whale watching on this full-day safari tour from Friday Harbor. Set sail on Kestrel, a fast and comfortable vessel designed for optimal wildlife viewing in the stunning Salish Sea. Search for orca whales, humpbacks, seals, sea lions, marine birds, and a variety of other species. With a small group size of just 16 guests, personalized attention from knowledgeable Marine Naturalists is guaranteed as you navigate through unique marine habitats. Enjoy the beauty of the San Juan Islands while keeping warm in provided exposure suits. Don’t forget to bring your packed lunch and snacks for this unforgettable day on the water. - 5-to-6-hour adventure with a maximum group size of 16 for a personalized experience - Provided exposure suits to keep you warm and dry on the water - Expert guidance from Marine Naturalists and Captains for an immersive experience - Perfect for whale enthusiasts ages 13+

Explore the stunning Orcas Island, the largest of the San Juan Islands, on a full-day tour departing from Bellingham. Enjoy a scenic drive along the Scenic Byway, taking in beautiful landmarks and natural beauty. Visit Orcas Village and the Ferry Landing, then immerse yourself in the lush landscapes of Moran State Park and Obstruction Pass State Park. The tour also offers opportunities to discover local art galleries and museums, making it a culturally enriching experience. - Full-day tour of Orcas Island with scenic views and landmarks - Visit Orcas Village and Ferry Landing, perfect for relaxation - Explore the natural beauty of Moran and Obstruction Pass State Parks - Optional visits to local art galleries and museums for cultural enrichment

A full-catered trip, this multi-day tour takes you to experience kayaking and camping in the San Juan Islands, specifically Cypress Island. This island is a gem within the San Juan archipelago, boasting protected conservation and natural areas that teem with wildlife. Explore miles of trails leading to viewpoints and secluded coves with pebble beaches. Enjoy having exclusive access to this hidden paradise during this tour.