Top Puerto Rico Water Tours

Please read all info! Join us for a once-in-a-lifetime adventure in fully clear kayaks in the world’s brightest bioluminescent bay! Watch fish light up as you paddle while learning the science behind this magical natural wonder Meeting Location: Across from the Sun Bay Beach entrance/sign in Esperanza✨️ Meeting Time: 25 minutes before your scheduled tour time. We have a 10 min check-in window for all tours. Departure Policy: Tours run on schedule and depart at the end of the check-in window, exactly 15 min before your tour time. ✨️Vieques is a separate island from mainland Puerto Rico. We recommend booking ferry tickets online 2–3 weeks in advance. Overnight stay recommended :) Guests on the earliest tour can catch the latest ferry on weekdays at 9:30 PM. On weekends the latest ferry is 9 PM, so we do not recommend trying to return on that ferry as it cuts time very close. ✨️Free cancellation BEFORE the 24-hour policy. Missed tours are non-refundable. $25 per person to reschedule

Experience one of the most magical natural phenomenons in Puerto Rico during a kayak tour of a bioluminescent lagoon. Exploring in a kayak lets you get closer to the illuminated plankton, which produce blue-green light every time you move through the water with your paddle and kayak.

Sail to Isla Icacos on this full-day cruise from Fajardo aboard a modern 51 ft. sailing catamaran. Relax and enjoy the scenery as you travel, then snorkel among reefs teeming with tropical fish and spend time on the beach. Midday, enjoy a sandwich buffet lunch with beverages included. Hotel pickup and drop-off from San Juan, Condado, and Isla Verde areas are provided for convenience.

Embark on a cruise through open waters from Fajardo to beautiful Icacos Island, on board the Tortuga. There, you can get active by snorkeling the reefs with the provided gear, and see diverse marine life. If you’d rather just relax, hang out on the beaches or on board the boat while the crew provide complimentary tropical drinks, including local rum, and a fresh, tasty lunch.

Condado Lagoon is one of the best places to kayak in Puerto Rico, which means it often gets crowded. This guided tour lets you sidestep the crowds by taking you out onto the water in the early morning. Best of all, you'll paddle through the lagoon in a glass-bottom kayak for full, 360-degree views.

Check in time 7:00am. Depart from Villa Mariana at 8:00 AM and set off for Icacos Island on our Amazing 50 Ft Traveler Catamaran. You will reach the island after about 50 minutes. Begin exploring the waters surrounding the island. Once at the beach you will have a break for lunch and drinks which is provided on board. After lunch, we will be moving to the coral reed; here you can enjoy our water slide and immerse yourself in the lively marine world under the water. Take the afternoon to sit back and relax in the sun and soak up the beautiful atmosphere while enjoying delicious drinks. **For this tour minors must be 4 years or older and expecting women or people with back or neck problem will not be boarded for safety measures. Max 48 passengers.

Join this group tour to visit waterfalls, tropical natural scenery, caves, and more in San Juan. You’ll keep costs down by joining this group tour, but you’ll still have plenty of time to explore the Arenales Caves, Charco River, and swim in the waterfall at your own pace. Snacks, water, and life vests are provided, so no need to bring those yourself.

Combine the thrill of riding a jet ski with sightseeing through San Juan Bay with a guided jet ski tour. Ride solo or with a passenger as you follow your guide around on a comfortable Yamaha Wave Runner with cruiser seats. Enjoy views of San Juan and attractions such as Castillo San Felipe del Morro and La Fortaleza from the water for a great photo opportunity.

Bioluminescence in La Parguera, Puerto Rico. During your visit to Puerto Rico, this is a must-do experience—enjoy this natural phenomenon on a unique Chiliboats Waterbike adventure. Tiny microorganisms make the water glow at night, creating sparkling light with every movement of your hands or feet. We will pedal for approximately 25 minutes on our Chiliboats Waterbikes to reach the bioluminescent bay. Unlike traditional kayak tours, this experience offers greater stability, comfort, and smooth pedaling. This bay is part of a protected natural reserve, where you can enjoy the ecosystem and, on clear nights, a sky full of stars. All tours are conducted on double Chiliboats. Participants must meet height (54" – 6'5") and weight limits (240 lbs per person / 450 lbs combined). Join our professional local guides and enjoy one of the most unforgettable nighttime experiences in Puerto Rico.

NOTICE: We are not responsible for ferry delays, cancellations, or any issues related to ferry services. These are completely out of our control. If you miss your tour due to ferry problems, there will be no refunds or rescheduling. We strongly recommend arriving in Vieques ahead of time. Plan accordingly and responsibly. What makes our tour special: • Maximum bioluminescence – Vieques is home to one of the brightest bioluminescent bays in the world, and we take you at the perfect time to witness it at its peak. • Small groups for a more intimate experience – No crowds. We want you to feel the serenity and magic of the place without interruptions. • Expert and passionate guides – They won’t just take you to the bay; they’ll share the science and secrets behind this unique natural phenomenon. • If you’re looking for more than just a simple kayak ride, but rather a transformative experience, this tour is for you. Book now and get ready for a night you’ll never forget!

Set sail across the Caribbean on this 1.5-hour cruise from San Juan and enjoy unforgettable views of the Puerto Rican capital. Hop aboard a traditional sailboat and sip complimentary drinks as you cruise along the coast. Keep your camera to hand as you pass landmarks and spot dolphins and sea turtles swimming and playing around the boat.

Paddle into the glowing waters of Puerto Rico’s famous Bio-Bay.Watch the water light up with every movement.Learn about this rare natural phenomenon from expert guides.Safe and fun for all experience levels.

Spend a day out on the water in Puerto Rico and explore Icacos Cay with this private, all-inclusive experience. Board your vessel and indulge in a diverse selection of snacks and beverages, from sandwiches to local favorites throughout the tour. While you sail, your captain points out local marine life and other points of interest. Enjoy stops for swimming, snorkeling, and sunbathing on pristine white sands before heading back to the main island.

Combine a trip to El Yunque, with some beach time in Luquillo, on this full-day group tour! You'll start in El Yunque, where you'll take a walk out through the forest, get the chance to swim in crystalline rivers, and slide down natural waterslides at Las Paylas. You'll then continue to Luquillo, where you can spend time at the local beach, shop, and grab food (own expense) at Los Kioskos before returning to San Juan.

Venture into the heart of Puerto Rico’s lush El Yunque rainforest during this small-group, half-day excursion from the San Juan area. Following morning pickup directly from your hotel, travel via air-conditioned vehicle into the forest, where you’ll go for a hike through the foliage, and learn more about the wildlife that calls El Yunque home. Next, swim in natural pool, go cliff-diving and rope-swinging if you dare, and admire the waterfalls.

See the city lights of Puerto Rico on this night kayak excursion on the Condado Lagoon. You’ll be in a top-notch kayaks equipped with navigation lights, which you’ll turn on when the sun goes down. You can also paint your face and body with glow in the dark paint, so you’ll light up when the sun goes down, too. Have a blast seeing Puerto Rico in a whole new way.

Take command of your own mini-speedboat for a half-day of snorkeling and navigating among the beautiful tropical islands just off Puerto Rico’s east coast. Follow the lead of your certified guide as you pilot your own vessel with a convoy of other speedboats through the turquoise-blue waters of the La Cordillera Cays Nature Reserve. During the day, snorkel amidst schools of colorful fish and relax on stunning white-sand beaches. Your speedboat adventure also includes a guide, a personal cooler with ice, snacks and refreshments, plus snorkel and safety gear.

Escape the crowds on land and see a part of Puerto Rico that most travelers miss on a sailing tour by catamaran to Culebra Island —home to white-sand beaches and coral reefs, and hailed as one of the most beautiful islands in the world. Lunch, alcoholic drinks, and snacks are included on board, to keep you hydrated and refreshed. A visit to Culebra is weather-dependent, so other possible beach stops include the beautiful Icacos island or one of Vieques' beaches.

Experience the beauty of Culebra Island at your own pace with a hassle-free day trip designed for independent travelers, families, and adventure seekers. Explore top spots like Flamenco Beach, Tamarindo Beach, or choose a boat trip to Culebrita, depending on your interests. Enjoy a personalized booking link and dedicated support to reserve exactly what you need, including Jeep or golf cart rentals, snorkeling tours, boat trips, taxis, and beach chair and umbrella rentals at Flamenco Beach. All tours and rentals on Culebra are booked and paid separately, giving you full flexibility. Travel with direct, stress-free transfers from San Juan and a priority-style return service that avoids parking hassles, long ferry lines, and crowded shuttles. Schedule: Mon–Fri: Shuttle 6:45 am | Ferry 9:00 am | Return 5:30 pm | San Juan 8:45 pm Sat–Sun: Shuttle 5:55 am | Ferry 8:00 am | Return 4:00 pm | San Juan 6:45 pm An easy, flexible, and worry-free way to discover Culebra.

Experience the magic of Puerto Rico’s coastal ecosystems on this guided nighttime kayaking tour, starting in Fajardo’s mangrove forest and leading to the glowing waters of Laguna Grande. Paddle through winding channels as night falls, and witness the natural wonder of bioluminescence—caused by plankton lighting up the water with every stroke. While brightness levels vary depending on natural conditions, guides may use a tarp to block moonlight and enhance visibility, helping you to make the most of your time on the water—an experience you'd miss out on if exploring solo.

Check in time 7:30am. Depart from Villa Mariana at 8:30 AM in our Motor Boat and set off for Culebra Island by boat. You will reach the island after about 50 minutes. Culebra Island is home to a majestic coral reef that you have the opportunity to explore. If you are not an expert snorkeler, it is not a problem because you will have guides available to offer you one on one lessons before you get into the water. Once in the water, immerse yourself in the lively marine world under the water. After the snorkeling portion of the tour is complete, you will have a break for lunch, which is provided on board. **For this tour minors must be 5 years or older and expecting women or people with back or neck problem will not be boarded for safety measures. **In the event of unfavorable sea conditions, our tour will be rerouted to Vieques Island, provided conditions allow. This ensures a safe and equally delightful experience for all our guests. Max 55 passengers

There are many great snorkeling spots around Puerto Rico, but this tour will take you to one of the best, off the island of Culebra. In between enjoying lunch, complimentary drinks, and the sea air, make two snorkeling stops where you can jump off-board and explore the underwater world.

Embark on a mesmerizing adventure with our Bio Bay tours, where you'll glide through the bioluminescent waters of Mosquito Bay and witness the breathtaking glow created by tiny organisms called dinoflagellates. These microorganisms emit light when disturbed, creating a magical display as each paddle stroke ignites trails of sparkling blue. Travel Notice: If returning to Puerto Rico on the late ferry, book our 7:00 PM tour Monday- Friday. Coordinate transportation in advance. Ferry Ticket Recommendation Secure your ferry tickets when you book your tour. For the best chance of a seat, purchase in person at the Ceiba ferry terminal. Our tours require a minimum number of participants and may be rebooked or canceled if that number isn’t met. Travel light and bring only essentials. By arranging both your tour and ferry tickets early, you can relax and enjoy your adventure worry-free!