Top Malta Water Tours

200+ results

Malta Valletta, Cruise Liner Excursion - Blue lagoon Boat Tour

Make the most of your time in Malta with this 4-hour tour designed for cruise passengers. We’ll pick you up from the Valletta Cruise Terminal and drive you to the boat departure point, where a semi-private cruise begins. Kindly note this tour is for cruise ships guests only. Explore the stunning coastline around Comino Island, including the Blue Lagoon, Crystal Lagoon, Comino Caves, Santa Marija Bay, San Niklaw Bay, Cominotto, and more. Swim and snorkel in the bluest waters, away from the crowds, with plenty of time to relax on board. After the boat tour, we’ll continue by land with a quick photo stop at the historic Red Tower, offering panoramic views of Gozo and Comino. Then we visit Popeye Village and Anchor Bay for a 5-minute photo stop of this famous film set and coastal scenery. We’ll return you to the Valletta Cruise Port with plenty of time before your ship departs. This is the perfect mix of sea and land—half by boat, half by road, and all unforgettable.

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Malta Valletta, Cruise Liner Excursion - Blue lagoon Boat Tour

4 hoursFree Cancellation

4.5

(69)

from $105

Blue Lagoon, Comino & Gozo Island Cruise - Swim, Slide & Sightsee

7 hoursFree Cancellation

4.6

(2,012)

from $41

Enjoy a thrilling, fast boat ride exploring Comino, Cominotto, and Blue Lagoon on a private 1-hour charter.

Exclusive & Private Experience – Avoid the crowds of Comino with a private boat tour tailored just for you. No shared groups, just your friends, family, and a professional skipper. Secluded & Crystal-Clear Waters – Unlike large tourist boats, we anchor in the bluest, most peaceful areas of Blue Lagoon and Crystal Lagoon, ensuring a relaxing and scenic experience. Fast, Flexible & Time-Saving – Perfect for those short on time or not wanting to spend all day on the water. In just 1 hour, see the best of Comino, Blue Lagoon, Crystal Lagoon & Comino Caves. Swim or Cruise – Your Choice – Enjoy two quick swim stops or cruise seamlessly between stunning locations while soaking in the breathtaking coastline. Comfort & Fun Onboard – Our modern speedboat features a sun canopy, WiFi, Bluetooth speakers, fresh-water shower, icebox with ice, and snorkeling gear for the ultimate adventure.

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1 Hour Private Boat Tour to Crystal Lagoon and Blue Lagoon Comino

1 hourFree Cancellation

4.9

(13)

from $24

Mellieha: Gozo, Comino, Sea Caves, and Blue Lagoon Cruise

4 hoursFree Cancellation

4.7

(204)

from $35

The Three Fortified Cities of Malta Half Day Tour Incl. Boat Trip and Transfers

The Three Cities is a collective description of the three fortified cities of Cospicua, Vittoriosa and Senglea. The oldest of the Three Cities is Vittoriosa, which has existed since the Middle Ages. The other two cities, Senglea and Cospicua, were both founded by the Order of the Knights of Saint John in the 16th and 17th centuries respectively. During this half-day tour, you will have the opportunity to appreciate these unique historical fortified cities and admire magnificent churches, traditional piazzas, incredible fortifications, and architectural treasures found all around the Three Cities area, pieces of living history kept alive by hundreds of years of preservation!

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The Three Fortified Cities of Malta Half Day Tour Incl. Boat Trip and Transfers

4 hoursFree Cancellation

4.1

(117)

from $47

Spend the day off the coast of Comino in a catamaran in the clear blue water of the Mediterranean. The “Sea Adventure” is a large vessel, with tons of amenities, including three water slides, washrooms, two bars with drinks and food (own expense), air conditioning on the main deck, and more. Cruise out for a fun day of splashing and sun at Crystal Lagoon (seasonal) and the Blue Lagoon.

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Comino Island: including Blue Lagoon, Crystal Lagoon & sea caves

4 to 6 hoursFree Cancellation

4.4

(761)

from $36

Half day Cruise - Comino, Gozo, Blue & Crystal Lagoon, and Caves

3 to 4 hoursFree Cancellation

4.5

(95)

from $36

Likely to Sell Out

Private Boat Charter Blue Lagoon Crystal Lagoon Comino and Gozo

Coastal Escape Boat Charters offers private boat trips around the stunning islands of Gozo and Comino, perfect for couples, families, or small groups of up to 7 guests. Departing from Ċirkewwa or Mġarr, enjoy crystal-clear waters and hidden coves, exploring iconic spots like the Blue Lagoon and Crystal Lagoon. Each charter includes a licensed skipper, fuel, and premium amenities for your comfort. - Enjoy a complimentary Gozitan platter while at sea - Relax on spacious bathing areas with sun canopies and lounge - Snorkelling gear and underwater lighting available for magical swims - Choose from morning, afternoon, sunset, or full-day charters

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Private Boat Charter Blue Lagoon Crystal Lagoon Comino and Gozo

4 hoursFree Cancellation

5.0

(28)

from $438

Per group

Malta: Blue Lagoon & Gozo with Crystal Lagoon Sea Caves

Experience the ultimate Comino adventure on our exclusive 5-hour Boat tour, starting from Marfa Jetty. Relax and indulge in the beauty of the Mediterranean as we take you to the iconic Blue Lagoon, and the serene Santa Marija Bay. Along the way, marvel at the natural wonder of Elephant Rock and explore the enchanting Santa Marija caves. Snorkeling equipment is also included, allowing you to explore the vibrant marine life beneath the waves. Book your spot today for a perfect blend of relaxation and adventure on the crystal-clear waters of Comino! You will also have a 2-hour stop in the island of Gozo.

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Malta: Blue Lagoon & Gozo with Crystal Lagoon Sea Caves

5 hoursFree Cancellation

5.0

(6)

from $36

Luxury Private Boat Tour: Comino, Gozo & Stunning Lagoons

Experience the beauty of Malta’s waters on a boat adventure like no other! Departing from Ċirkewwa, Malta, or Mġarr, Gozo, you’ll explore breathtaking spots, including the iconic Blue Lagoon, Crystal Lagoon, and Santa Maria Bay. Swim in crystal-clear waters, snorkel in vibrant underwater worlds, and enjoy the peaceful surroundings of hidden bays. Along the way, marvel at natural wonders like Santa Maria Caves and Elephant Rock, and capture unforgettable views of Gozo’s coastline. Perfect for all ages, this tour combines relaxation, exploration, and adventure. Book now for a day filled with memories!

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Luxury Private Boat Tour: Comino, Gozo & Stunning Lagoons

3 to 7 hoursFree Cancellation

5.0

(9)

from $290

Price varies by group size

Special Offer

comino island malta private boat charter, trip to the best beaches, secluded bays and crystal blue waters

Malta Private Boat Tour: Gozo, Comino, Blue Lagoon Crystal lagoon

3 hoursFree Cancellation

Embark on our unforgettable journey with our exclusive boat. Set sail for adventure as we whisk you away to the stunning shores of this Mediterranean paradise. Indulge in the ultimate VIP experience as you cruise in style, sipping on chilled beverages and soaking up the sun. With personalized service and expert guidance from our crew, every moment of your journey will be tailored to exceed your expectations. Don't just dream of paradise - book your trip and make unforgettable memories that will last a life time.

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Half Day Blue Lagoon, Comino, Gozo and Malta Private Boat Trip

4 hoursFree Cancellation

5.0

(53)

from $260

Per group

The Traditional Harbour Cruise

1 hour 30 minutesFree Cancellation

3.8

(161)

from $24

Blue Lagoon, Beaches and Bays Catamaran Sailing Tour

6 hoursFree Cancellation

4.5

(1,271)

from $65

Malta: Private Boat Trip & Cruises Comino, Blue Lagoon, Gozo

4 hoursFree Cancellation

5.0

(100)

from $249

Per group

Private Boat Charter: Gozo, Comino, Blue Lagoon, Crysral Lagoon

2 hoursFree Cancellation

4.9

(116)

from $236

Per group

Valletta Harbour Cruise

1 hour 15 minutesFree Cancellation

4.7

(154)

from $24

Join us for an unforgettable half-day adventure aboard our premium catamaran, exclusively accommodating just 20 guests. This journey offers relaxation, stunning scenery, and exceptional service. We begin with a visit to the majestic Santa Maria Caves, where you'll admire the dramatic rock formations and crystal-clear waters. Next, we sail to the Blue Lagoon, famous for its turquoise waters, where you can swim, relax, or explore the beach. We then head to the tranquil Crystal Lagoon for a serene swim in pristine waters. Throughout the trip, enjoy refreshing beverages as you unwind on deck or explore the sea. This exclusive catamaran experience is perfect for creating lasting memories.

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Half Day Scenic Catamaran Experience

4 hoursFree Cancellation

4.9

(49)

from $59

Kayak Gozo and Comino Guided Kayak Adventure

3 hoursFree Cancellation

5.0

(396)

from $71

Private Boat Tour of the Grand Harbour on the Island of Malta

35 minutesFree Cancellation

5.0

(47)

from $40

Malta: Private Boat Trip to Comino, Blue Lagoon & Gozo

Set sail on a private boat trip that takes you to some of Malta's most stunning locations. This exclusive tour is perfect for those looking to experience the best of Malta’s crystal-clear waters and iconic landscapes in a private setting and comfort. Book this exclusive private boat trip and immerse yourself in the beauty and charm of the islands of Malta. It’s not just a boat trip; it’s an experience that will leave you with lasting memories and a deep love for Malta’s natural treasures.

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Malta: Private Boat Trip to Comino, Blue Lagoon & Gozo

4 hoursFree Cancellation

5.0

(48)

from $255

Per group

Comino & Blue Lagoon | Mitzi Boat Tour with a special touch!

The ultimate full-day boat tour for explorers & chill-seekers! Spend 7 hours discovering the best of Comino, with stops at secluded spots, famous lagoons, and hidden gems. Enjoy extra swim time, a delicious charcuterie platter & a cold drink, and a laid-back yet personal atmosphere. ✔ Visit Blue Lagoon, Crystal Lagoon, Santa Maria Caves & secret spots ✔ Snorkel, sunbathe & soak in stunning coastal views ✔ Small-group shared tour (max 14 guests – semi-private) ✔ The perfect mix of adventure & relaxation

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Comino & Blue Lagoon | Mitzi Boat Tour with a special touch!

7 hoursFree Cancellation

4.9

(31)

from $115

Malta blue waters private boat charter to the best loactions for swimming

Malta Private Boat Trip: Blue Lagoon, Gozo and Comino T3

2 to 4 hoursFree Cancellation

4.9

(173)

from $165

Per group

Special Offer

Comino, Blue Lagoon & Gozo Private Boat Trips

Escape the ordinary and experience Malta’s most breathtaking coastal gems on an exclusive private boat tour. With a professional skipper at the helm, you’ll sail through the island’s most stunning locations, ensuring a seamless mix of adventure, relaxation, and exploration. Dive into paradise at the Blue Lagoon, where the crystal-clear, turquoise waters invite you for a refreshing swim. Snorkel through the mesmerizing Crystal Lagoon, discovering hidden sea caves and vibrant marine life beneath the surface. Then, set course for Gozo, where towering cliffs, secret coves, and untouched beaches await—perfect for sun-seekers and explorers alike. This private boat trip is designed for those who crave freedom, comfort, and exclusivity. Whether you’re soaking up the Mediterranean sun, exploring sea caves, or enjoying a refreshing dip in the clearest waters, this is the ultimate way to discover Malta by sea.

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Comino, Blue Lagoon & Gozo Private Boat Trips

3 to 5 hoursFree Cancellation

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Top Malta Water Tours

200+ results

Top Attractions in Malta

Hagar Qim

Blue Grotto

Ta’ Qali Crafts Village

Three Cities

St. John's Co-Cathedral (Kon-Katidral ta' San Gwann)

Popeye Village Malta (Sweethaven Village)

Hagar Qim

Blue Grotto

Ta’ Qali Crafts Village

Three Cities

St. John's Co-Cathedral (Kon-Katidral ta' San Gwann)

Popeye Village Malta (Sweethaven Village)

Hagar Qim

Blue Grotto

Ta’ Qali Crafts Village

Three Cities