Top San Juan Water Tours - page 3

El Yunque Off the Beaten Path Tour with Transportation

This experience takes travelers to the Bioluminescent Bay of La Parguera, one of the very few bioluminescent bays in the world where visitors can explore the glowing waters by boat and snorkeling. Guests will witness the magical natural phenomenon of bioluminescence as the water lights up around them, creating a truly unforgettable experience. The tour includes round trip transportation, snacks, and guided snorkeling, allowing travelers to safely immerse themselves in this rare ecosystem while learning about the science and conservation of bioluminescence from knowledgeable local guides. This tour is ideal for adventure seekers, couples, families with older children, and nature lovers looking for a once in a lifetime, fairytale like experience.

(630)

from $69

Bioluminescent Bay Boat Tour Transport Snack and Snorkeling

Bioluminescent Bay Boat Tour Transport Snack and Snorkeling

8 hours

Feel like a real-life explorer as you go hiking, swimming, and exploring in Puerto Rico’s El Yunque rainforest. Journey into the beautiful tropical scenery of this lush forest without worrying about getting lost as you hike and enjoy a natural waterslide where you can zoom 20 feet (6 meters) into a pool of water below. Plus, exploring with a guide heightens your chance of spotting rare wildlife.

from $250

From San Juan: El Yunque Rainforest Hiking Adventure

Kayak through the waters of Laguna Grande, a stunning bioluminescent lagoon, during this half-day tour from San Juan. Watch the glowing organisms in the water light up as your kayak slides through the water. Paddle through stands of mangrove trees and watch small fish dart through the water underneath your boat like shooting stars. Stop for a break with snacks and refreshments before heading back to your starting point. Use of all kayaking equipment and round-trip hotel transfers are included.

(181)

from $103

Bioluminescent Bay Kayak Adventure Tour from San Juan

Bioluminescent Bay Kayak Adventure Tour from San Juan

6 hoursFree Cancellation

3.8

(202)

from $108

San Juan Puerto Rico Mini Boats Adventure

Your tour will depart from the San Juan Bay Marina after a brief safety orientation. You'll take the helm of a 13′ rigid inflatable boat, which you will operate throughout the entire tour. The journey begins with a cruise around Condado and the Puerto Rico Convention Center. After a short stop, where the guide will highlight key points of interest, the fleet will continue along the southern shores of the Islet towards the Historic District. As you navigate, you'll feel the warm Caribbean breeze and might catch glimpses of the local wildlife. The group will regroup to learn about the area's landmarks, including the San Juan Wall, the Bacardi Rum Factory, the Governor’s Mansion, and Puerto Rico’s most famous fort, Fort San Felipe Del Morro—a perfect spot for capturing stunning photos. Maximum capacity and weight limit: 3 people or 600 lbs.

San Juan Puerto Rico Mini Boats Adventure

1 hour 30 minutesFree Cancellation

Immerse yourself in an unforgettable adventure with our El Yunque rainforest and Puerto Rico Caribbean San Juan snorkeling combo tour! Delve into the lush wonders of El Yunque rainforest, where nature trails, waterfalls, and panoramic vistas await. Then, dive into the crystal-clear waters for a snorkeling from shore experience like no other. Discover the beauty of both land and sea in one remarkable journey, led by expert guides who ensure an unforgettable experience. Book now and make memories that will last a lifetime!

(1)

from $289

Per group

Combo El Yunque Rainforest and San Juan Snorkeling with Transport

Combo El Yunque Rainforest and San Juan Snorkeling with Transport

El Yunque Rainforest, Waterslides & Beach Tour from San Juan

4.2

(11)

from $175

6 to 8 hoursFree Cancellation

4.9

(30)

from $95

El Yunque Rainforest Morning River and Hike Adventure

Experience the wonders of nature and breathe in the fresh air on a 7-hour tour to Las Tinajas in Ceiba, Puerto Rico. The well-defined trails make this adventure ideal for families. Embark on an off-the-beaten-path hike lasting 20-30 minutes, where exotic plants and birds abound. Your guide will provide fascinating insights into the flora and fauna of this remarkable location. At the Tinajas natural pool and waterfalls, plunge into crystal-clear waters and enjoy swinging from a rope or leaping from rocks up to 15 feet high. Next, a 5-10 minute hike leads to another natural pool featuring a 20-foot waterslide and an optional 3-foot jump from a rock. After our El Yunque adventure, savor authentic Puerto Rican cuisine. This experience guarantees that you'll yearn to return to Puerto Rico every time you seek an escape to paradise.

El Yunque Rainforest Morning River and Hike Adventure

7 hoursFree Cancellation

Experience the natural phenomenon that is Bio Bay on an evening kayak tour. Head from San Juan to Fajardo and in the late afternoon and board your kayak. As you paddle through the mangrove forest, the microscopic organisms in the water become illuminated, creating a magical effect. Learn about the bioluminescent creatures as well as the surrounding environment from your tour guide as you kayak.

(4)

from $120

Bio Bay Night Kayak Tour with Transport from San Juan

4 hoursFree Cancellation

4.4

(136)

from $125

Yunque Rainforest River Rope Swing with Waterslide and Beach Tour

6 to 7 hoursFree Cancellation

Toro Negro River Hike & Cliff Jumping Adventure; San Juan Pick Up

(131)

from $109

Price varies by group size

(23)

from $165

Utuado Canyon, River & Waterfall Adventure in Puerto Rico

8 to 9 hoursFree Cancellation

USDA El Yunque National Forest and Luquillo Beach Tour

(63)

from $165

6 hoursFree Cancellation

Why settle for a big, crowded tours when you can have a Private exclusive adventure tailored for your group. Leave behind the long line waits, and jump into an unforgettable half-day express tour of El Yunque of Puerto Rico—the only tropical rainforest in the U.S. But here's the unexpected twist: after exploring the popular spots—sliding down the exhilarating 20-foot natural water slide, swinging from a rope into a jungle pool, and cliff jumping from daring heights—your guide will lead you to a hidden part of the jungle, a secret path known only to locals. This path takes you to a secluded lagoon surrounded by lush greenery, with cascading waterfalls that look like they belong in a postcard. You'll have time to relax, swim, and even explore a hidden cave behind the falls—a true Caribbean paradise that feels like it’s just for you. It’s not just a tour; it’s an exclusive adventure with unexpected surprises waiting at every turn. Join us for an experience that’s anything but ordinary!

(12)

from $79

Private - El Yunque Rainforest Puerto Rico Tour

Private - El Yunque Rainforest Puerto Rico Tour

5 hoursFree Cancellation

4.7

(32)

from $125

Full-Day Tinajas Hiking to El Yunque Rainforest with Transport

It isn’t a trip to Puerto Rico without exploring El Yunque rainforest—and this small-group, full-day tour from San Juan makes visiting simple. Following morning pickup from your hotel, head into nature. After a hike, where you can spot plants and wildlife, see the Tinajas waterfalls and swim in a natural pool. Then, continue to a second swimming hole with a natural waterslide. Finish with a hearty Puerto Rican meal (own expense).

Full-Day Tinajas Hiking to El Yunque Rainforest with Transport

7 hoursFree Cancellation

Leave the bustling city of San Juan behind and embark on a private day trip to the southern coast. Drive to Parguera and then board your private boat for a day of snorkeling, swimming, and soaking up the sun. Sail to small islands, watch a beautiful sunset, and end your day observing the unique bioluminescent microorganisms that call this area home. You'll even get filmed footage of your experience.

(66)

from $200

Swimming and interacting with the bioluminiscence of La Parguera Biobay is the ultimate nature's experience in our private Snorkeling, Sunset and Bioluminiscense Swim Experience by Bucketlist Tours.

Private Snorkeling, Sunset & Bioluminiscent Bay Swim Boat Tour

9 hoursFree Cancellation

4.6

(56)

from $900

Price varies by group size

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Top Attractions in San Juan

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Attractions

What are people saying about San Juan

3 in 1 Full Day Cueva Ventana, Indian Cave & Waterfall Adventure

Joseph_V, Aug 2026

Awesome experience with...

Awesome experience with Jose. He knew everything about the area, the waterfall, the driving routes, the people. He gave us really interesting history and insight into each attraction and the area. We were safe and prepared. My kids loved the caves and waterfall, and Jose was the perfect guide!

Arenales River Caving, Waterfall &Tropical Forest Secret Spring

Ethan_C, Aug 2026

Scenic Waterfall & Cave tour in Arenales

An absolute must experience tour! There’s so much history in the tour all while getting to see amazing views. We’ve been on multiple tours and Yamile was very knowledgeable at anything we asked questions about, not only that but took amazing pictures for me and my friend. Overall a fantastic send off for our last day and would recommend to anyone visiting!!!

Half Day Icacos Island with Roundtrip Transport from San Juan

Liz_W, Aug 2026

Icacos 1/2 day snorkle

We had an excellent and seamless experience with our half day tour. From pick up to drop off, everything was so easy and well organized. We had a great time snorkeling and swimming on the beaches. We can’t wait to visit other islands/do other tours with this company!

San Juan Snorkeling Tour with Fish and Turtles

Valerie_D, Jul 2026

Excellent guides and a great family fun experience

Beautiful views, excellent guides and a really family fun experience. Anthony and Antonio really took care of us since it was many of the family’s first time snorkeling in the sea. There was low visibility since we were so close to shore but we still saw a lot of fish, crabs and underwater ruins. We also booked last minute and Monique really helped us quickly. We would definitely do it again.

Vieques Bio Bay Tour and Beach Day Trip from San Juan by Ferry

Kerry_G, Jul 2026

Awesome tour! With worry free transport.

When coming on this tour bring a backpack and with waters snacks water shoes and lots of sun block. With that being said Rafa the tour guide was great, he explained everything around the island then when David the bio bay tour on the kayak was very knowledgeable and funny over it was a awesome experience to see the water light up when you stir and agítate it.

San Juan Turtle Spotting Snorkel Adventure with Videos

Abby_R, Jun 2026

Under the Sea

Shayla was our instructor. She was very knowledgeable, helpful and sweet. She took us all over and gave us an amazing experience. We were able to see a lot of different fish, lobsters, and we swam with a sea turtle and in a school of beautiful blue fish. I definitely recommend it and would do it again. 10/10!

Half-Day Tour: El Yunque Rainforest and Waterslide Adventure

Paul_C, Apr 2026

A MUST DO if you’re in Puerto Rico!

We had an amazing experience trekking the El Yunque rainforest, watersliding down a waterfall, leaping into the water from a rocky cliffside, and also rope swinging into the water. It was absolutely amazing and a must if you visit Puerto Rico. Considering everything provided, it was very affordable. We had a flight leaving later that evening and I wasn’t sure if we’d have the time to do the tour. But it worked out perfectly. Our tour lasted from 10:30 to 2:30, and we still had plenty of time to return our rental car and make the flight. The rainforest offers so much in terms of untouched landscape, you really need to experience yourself in order to fully grasp. It’s a jungle, and almost feels like you’ve arrived at Jurassic Park…without the dinosaurs of course. So, nothing to run away, unless you’re scared of a tiny lizard. Crowd size was minimal. Our group had maybe about twelve people, from maybe 9 years old to 60. You do need to be somewhat physically fit and healthy to do everything. There’s a lot of rocky and slippery terrain to climb in order to to get to and from the waterfalls. Nene and Bradley, our tour guides were phenomenal and gave us an amazing experience. They’re fun, down-to-earth, and very knowledgeable. Whatever the question, they always seemed to have an answer. I felt very safe with them.

San Juan Mini Boat Tour

Lynn_C, Apr 2026

Big fun on mini boats

It was a lot of fun and we learned a lot more about the forts, the boats in the docks, other buildings and just had fun seeing everything, including a big iguana in the mangrove. Just know that if weather is bad or waves in the bay are high, you won't get to go out there and won't be swimming. But, we didn't mind ..the rest of it was great and Darnell was fantastic and funny!

San Juan Historical Bay Daytime Sailing Tour

Maribeth_F, Mar 2026

Wonderful Sailing Experience

We had the pleasure to Sail with Captain Joe and Carlos. The other couple was a no show so we had the boat to ourselves which made the experience even more special. The weather was beautiful and Joe was very knowledgeable about San Juan’s History. We would recommend this sailing adventure!!

San Juan Bay Private Tour with Drinks and Tapas: 4+ people

Anita_S, Feb 2026

Incredible sailing experience

Outstanding Highlight of our trip Captain Luis and Gaby were knowledgeable and so much fun! We were two couples and we had the most relaxing and enjoyable day with them We extended our trip by two hours because it was such a beautiful and relaxing experience We will definitely do this again b highly recommend