Top Puerto Rico Water Tours

Explore the beauty of Puerto Rico on this group tour of the northern coast. See the rock formations of the karst area along the Atlantic Ocean, continue to the mountains, and visit one of the most impressive caves on the island. Learn about the history of Puerto Rico from your experienced guide and end the day with a visit to two waterfalls where you can relax on the river.

The sparkling lights of bioluminescent plankton can only be seen once darkness falls, so this night kayaking adventure is the perfect way to see their fluorescent displays. Paddle through mangrove forests and Bio Bay while learning about the surrounding marine life from your guide. Ideal for paddlers of all abilities, this tour works with participants to ensure a comfortable experience, offering everything from extra seat padding to towing if needed.

Go snorkeling in an area that's known for turtle sightings with this small-group tour, led by a local guide. You'll head down into waters of a marine sanctuary area where turtles are known to congregate and having a guide on hand will help you increase your chances of spotting the aquatic creatures.

No trip to Fajardo is complete without visiting the stunning blue waters of the Caribbean. There are countless excursions available on the water; however, most have become a booze cruise and don’t give you the optimum atmosphere for exploring. This Fajardo Afternoon Boat and Snorkeling Tour still offers alcoholic beverages but gives you the energy to focus on snorkeling and learning about life under the sea.

Experience the beauty of Culebra Island at your own pace with a hassle-free day trip designed for independent travelers, families, and adventure seekers. Explore top spots like Flamenco Beach, Tamarindo Beach, or choose a boat trip to Culebrita, depending on your interests. Enjoy a personalized booking link and dedicated support to reserve exactly what you need, including Jeep or golf cart rentals, snorkeling tours, boat trips, taxis, and beach chair and umbrella rentals at Flamenco Beach. All tours and rentals on Culebra are booked and paid separately, giving you full flexibility. Travel with direct, stress-free transfers from San Juan and a priority-style return service that avoids parking hassles, long ferry lines, and crowded shuttles. Schedule: Mon–Fri: Shuttle 6:45 am | Ferry 9:00 am | Return 5:30 pm | San Juan 8:45 pm Sat–Sun: Shuttle 5:55 am | Ferry 8:00 am | Return 4:00 pm | San Juan 6:45 pm An easy, flexible, and worry-free way to discover Culebra.

Take a night kayaking tour from Las Croabas, through the mangrove channels of Las Cabezas de San Juan Nature Reserve to Laguna Grande. Here you can find the billions of microscopic plankton that live in the water and light up at the touch of your hand to create a beautiful, iridescent glow in the water. Learn about this natural phenomenon and its fragile ecosystem from your informative guide as you paddle through the lagoon. Please note the weight limit is 240 pounds per person.

Spend less time traveling and more time enjoying Puerto Rico's crystal-clear Caribbean waters on this half-day escape to Icacos Island. Snorkel vibrant reefs, unwind on white-sand beaches, and enjoy the freedom of exploring an offshore paradise that's difficult to reach independently. A smart hack travelers wanting an authentic island experience without committing to a full-day excursion.

Experience the natural phenomenon that is Bio Bay on an evening kayak tour. Head from San Juan to Fajardo and in the late afternoon and board your kayak. As you paddle through the mangrove forest, the microscopic organisms in the water become illuminated, creating a magical effect. Learn about the bioluminescent creatures as well as the surrounding environment from your tour guide as you kayak.

Kayak through the waters of Laguna Grande, a stunning bioluminescent lagoon, during this half-day tour from San Juan. Watch the glowing organisms in the water light up as your kayak slides through the water. Paddle through stands of mangrove trees and watch small fish dart through the water underneath your boat like shooting stars. Stop for a break with snacks and refreshments before heading back to your starting point. Use of all kayaking equipment and round-trip hotel transfers are included.

Get into the turquoise waters of the north-east coast of Puerto Rico with this private boat charter and snorkel adventure. You’ll start with pickup from your designated location, then you’ll board your boat for a half day of fun. Snorkel, swim, listen to your own tunes on the boat, load up the cooler with your favorite drinks, and enjoy this private experience for just you and your group.

**FERRY TICKETS TO CULEBRA OR VIEQUES ARE NOT INCLUDED AND ARE SOLD SEPARATELY** Skip the hassle and cost of getting to and from the Ceiba ferry terminal for your anticipated adventure to Culebra or Vieques! With the rising cost of Ubers and taxis, this is a safe, reliable, and budget friendly alternative to arrive at the ferry! Our professional, certified drivers will transport you by shuttle to the Ceiba ferry terminal from any of our pick up locations in Condado, San Juan, Old San Juan, Isla Verde, or Luquillo. Upon return to the Ceiba ferry terminal from your island of choice, your driver will be waiting for you and ready to take you back to your drop off location! With a scheduled pick up time, and arrival at the ferry 1 hour prior to departure, this is easily the most reliable and cost efficient way to start your adventure, and return home from either Culebra or Vieques! **TRANSPORTATION IS SCHEDULED TO ARRIVE AT THE CEIBA FERRY TERMINAL AT 7:30 AM AND DEPART AT 7:00 PM**

Watching the sunset from a private island is something few visitors to Puerto Rico get the chance to experience. This private cruise from Fajardo takes you and your group of up to six to an island off the east coast, where you can swim, enjoy provided Champagne and a charcuterie board, and watch the sky change color over the Caribbean Sea.

Spend an adventurous day exploring two incredible natural wonders in Puerto Rico on this full-day excursion to the El Yunque Rainforest and Bioluminescent Bay. Hike in the only tropical rain forest in the United States National Forest system. Then continue with a nighttime kayaking trip to the magical Bioluminescent Bay, which features a unique variety of plankton that glow when the water is touched or moved.

Pedal a unique double catamaran-style water bike through San Juan's Condado Lagoon. Enjoy calm waters as you pedal your way to landmarks. Soak up panoramic views and look out for wildlife like sea turtles and manatees on this eco-friendly adventure suitable for all skill levels. Minors must be accompanied by an adult, and all participants must properly fit USCG-approved life jackets.

Immerse yourself in nature with a guided tour to El Yunque Rainforest that takes care of all of the logistics. Hike through the jungle with a guide and enjoy time at a natural pool with a waterfall, natural waterslides, cliffs, and a rope swing. Life jacket, helmet, snacks, bottled water, photos and videos of the experience, and transfers including hotel pickup from San Juan are included.

Enjoy an unforgettable experience in our unique private boat ride at the bay of San Juan. You will have the opportunity to know some history and have some fun on our power boat around the bay of San Juan with great music system on board!

Improve your chances of seeing Laguna Grande's bioluminescent bay glow on this group kayaking tour. Led by a marine biologist guide, follow them in your kayak as you navigate extensive mangrove forests and learn the science behind this natural phenomenon that occurs in Laguna Grande. Suitable for beginners and advanced kayakers, with safety equipment and a brief kayaking lesson provided.

Enjoy Puerto Rico's waters from a luxurious 54-foot catamaran. How you spend your time is up to you: Recline on daybeds, shoot down water slides, or head to the open bar. Visit hidden parts of the Cordillera Cays where you can dive into the water with less crowds of tourists. Dine on an authentic Puerto Rican meal featuring pork, roasted chicken, and more.

Go sailing and watch the sunset on a cruise from San Juan. Get great photo ops of Puerto Rico’s coastline and enjoy a comfortable sail on the Caribbean Sea. Your captain shares commentary about the region and provides complimentary drinks for your group of no more than six people.

Enjoy a private half-day excursion to Palominos or Icacos islands from Fajardo. Spend the day as you wish aboard your private boat; swim in crystal waters, discover marine species with snorkel gear, or relax on white-sand beaches. When you’ve worked up an appetite, enjoy fruits, sandwiches, snacks, and non-alcoholic drinks on board.

Join an evening or nighttime adventure into the bioluminescent waters of Laguna Grande. After an orientation, hop into a kayak and paddle through the dense mangrove forests, heading to the area where the microscopic plankton puts on its surreal aquatic light show when you glide through the water. Your guide also tells you more about this fragile ecosystem and how visitors can help protect it.

This private sailboat charter from San Juan allows you to choose your own adventure. Sail around the bay and harbor of Old San Juan with an experienced captain and crew at the helm; you can choose to help sail or just relax and enjoy the ride. Bring whatever you prefer to sip on, as you watch the scenery. Ask any questions you may have about boating or the area.

This combination tour includes a visit to Luquillo Beach, El Yunque Rainforest and a nighttime kayaking tour of Laguna Grande, a bioluminescent bay. Stroll a walkway the winds through the treetops of the forest canopy. After a leisurely lunch (and time for shopping), travel to Laguna Grande to witness the unique phenomenon of bioluminescence.

Spend a day out on the water in Puerto Rico and explore Icacos Cay with this private, all-inclusive experience. Board your vessel and indulge in a diverse selection of snacks and beverages, from sandwiches to local favorites throughout the tour. While you sail, your captain points out local marine life and other points of interest. Enjoy stops for swimming, snorkeling, and sunbathing on pristine white sands before heading back to the main island.